STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_0802Conserved hypothetical protein. (140 aa)    
Predicted Functional Partners:
Csal_2248
Hypothetical protein.
  
     0.674
Csal_2550
Sulfatase.
  
     0.656
Csal_0253
Hypothetical protein.
  
     0.624
Csal_0801
Hypothetical protein.
       0.615
Csal_2610
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; TC 3.A.1.1.-.
  
     0.605
Csal_0055
Putative hemagglutinin/hemolysin-related protein.
  
     0.540
Csal_0216
Fusaric acid resistance protein conserved region.
  
     0.486
Csal_1754
Hypothetical protein.
  
     0.481
Csal_1375
Phage tail tape measure protein TP901, core region.
  
     0.449
Csal_3069
Acyltransferase 3.
 
     0.448
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.