STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_080737kDa nucleoid-associated protein. (331 aa)    
Predicted Functional Partners:
Csal_0808
ABC-2 protein.
       0.652
Csal_0809
ABC transporter related protein.
       0.652
Csal_2331
Conserved hypothetical protein.
  
     0.618
Csal_1223
Conserved hypothetical protein.
  
     0.574
Csal_1447
MscS Mechanosensitive ion channel.
 
     0.564
Csal_0864
Protein of unknown function SprT; Belongs to the SprT family.
  
     0.536
Csal_1222
Conserved hypothetical protein 374.
  
     0.527
Csal_2137
Hypothetical protein.
  
     0.522
Csal_2391
Protein of unknown function DUF1282.
  
     0.522
Csal_0806
Conserved hypothetical protein.
       0.505
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.