STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_1007Hypothetical protein. (771 aa)    
Predicted Functional Partners:
Csal_0241
Hypothetical protein.
 
    0.673
Csal_2798
Conserved hypothetical protein.
  
     0.639
Csal_0491
Tfp pilus assembly protein PilW-like protein.
  
     0.618
Csal_2712
Protein of unknown function DUF748.
  
     0.610
Csal_0837
Hypothetical protein.
  
     0.602
Csal_0183
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
     0.578
Csal_1769
Hypothetical protein.
  
     0.567
Csal_1006
Cation efflux protein.
       0.515
Csal_1988
Conserved hypothetical protein.
  
     0.513
Csal_0994
Major facilitator superfamily MFS_1.
  
     0.501
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.