STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_1024TRAP dicarboxylate transporter- DctM subunit. (433 aa)    
Predicted Functional Partners:
Csal_1025
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
   0.926
Csal_1026
TRAP dicarboxylate transporter- DctP subunit.
 
    0.869
Csal_0332
TRAP dicarboxylate transporter- DctP subunit.
  
    0.721
Csal_1747
TRAP dicarboxylate transporter, DctP subunit.
 
    0.719
Csal_0721
TRAP dicarboxylate transporter, DctP subunit.
  
    0.691
Csal_0306
TRAP dicarboxylate transporter- DctP subunit.
  
    0.686
Csal_1733
TRAP dicarboxylate transporter, DctP subunit.
  
    0.686
Csal_1072
TRAP dicarboxylate transporter, DctP subunit.
 
    0.679
Csal_0309
TRAP dicarboxylate transporter- DctP subunit.
  
    0.656
Csal_0271
TRAP dicarboxylate transporter, DctP subunit.
  
    0.636
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.