STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_1663Hypothetical protein. (142 aa)    
Predicted Functional Partners:
Csal_1665
TadE-like protein.
  
    0.810
Csal_1664
Membrane protein-like protein.
  
    0.803
Csal_1662
Tetratricopeptide TPR_2.
  
    0.754
Csal_1659
Type II secretion system protein E.
  
    0.626
Csal_1661
Type II secretion system protein.
  
    0.626
Csal_1660
Type II secretion system protein.
  
    0.620
Csal_1658
Type II and III secretion system protein; Belongs to the bacterial secretin family.
  
  
 0.496
Csal_1666
Diguanylate cyclase/phosphodiesterase.
       0.474
Csal_1657
Flp pilus assembly CpaB.
  
    0.415
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.