STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_1663Hypothetical protein. (142 aa)    
Predicted Functional Partners:
Csal_1664
Membrane protein-like protein.
  
    0.821
Csal_1662
Tetratricopeptide TPR_2.
  
    0.811
Csal_1665
TadE-like protein.
  
    0.806
Csal_1659
Type II secretion system protein E.
  
    0.660
Csal_1660
Type II secretion system protein.
  
    0.656
Csal_1661
Type II secretion system protein.
  
    0.649
Csal_1658
Type II and III secretion system protein; Belongs to the bacterial secretin family.
  
  
 0.600
Csal_1657
Flp pilus assembly CpaB.
  
    0.494
Csal_1666
Diguanylate cyclase/phosphodiesterase.
       0.474
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.