STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_1995FAD dependent oxidoreductase. (425 aa)    
Predicted Functional Partners:
Csal_1996
Conserved hypothetical protein.
 
 
 0.997
Csal_1997
Transcriptional regulator, GntR family.
 
  
 0.708
Csal_2648
PTS system D-fructose-specific IIA component (F1P-forming), Frc family / Phosphocarrier protein HPr; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family.
  
  
 0.476
Csal_0615
Glutamate synthase (NADPH) large subunit.
  
  
 0.459
Csal_1834
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
      
 0.420
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.