STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Csal_2001Cytochrome bd quinol oxidase subunit 1 apoprotein. (473 aa)    
Predicted Functional Partners:
Csal_2000
Cytochrome bd quinol oxidase subunit 2 apoprotein.
 0.999
Csal_1999
ABC transporter related protein.
 
  
 0.980
Csal_1998
ABC transporter related protein.
 
  
 0.959
Csal_0957
Cytochrome bo3 quinol oxidase subunit 4.
     
 0.838
Csal_0954
Cytochrome bo3 quinol oxidase subunit 2.
     
 0.694
Csal_0130
Rieske (2Fe-2S) protein.
  
  
 0.674
Csal_1313
Cytochrome B561.
  
   
 0.666
Csal_0996
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.663
Csal_2959
Thioredoxin reductase.
      
 0.663
Csal_1612
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
     
 0.649
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.