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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_2002Hypothetical protein. (89 aa)    
Predicted Functional Partners:
Csal_1998
ABC transporter related protein.
       0.545
Csal_1999
ABC transporter related protein.
       0.545
Csal_2000
Cytochrome bd quinol oxidase subunit 2 apoprotein.
       0.545
Csal_2001
Cytochrome bd quinol oxidase subunit 1 apoprotein.
       0.545
Csal_2003
Carbon starvation protein CstA.
       0.477
Csal_2004
Conserved hypothetical protein.
       0.477
Csal_2005
Arsenite efflux ATP-binding protein ArsA; TC 3.A.4.1.1.
       0.428
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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