Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Arth_0010 | Arth_0011 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | 0.595 |
Arth_0010 | Arth_0341 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | PFAM: polysaccharide deacetylase; KEGG: chy:CHY_1591 polysaccharide deacetylase family protein. | 0.459 |
Arth_0010 | Arth_0537 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | Hypothetical protein. | 0.575 |
Arth_0010 | Arth_0811 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | Hypothetical protein. | 0.555 |
Arth_0010 | Arth_1227 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | Polysaccharide deacetylase; PFAM: S-layer domain protein domain protein; polysaccharide deacetylase; KEGG: sma:SAV3292 hypothetical protein. | 0.459 |
Arth_0010 | Arth_1513 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | KEGG: lxx:Lxx01410 hypothetical protein. | 0.599 |
Arth_0010 | Arth_1651 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | Signal transduction histidine kinase, LytS; KEGG: cgb:cg3135 hypothetical protein. | 0.599 |
Arth_0010 | Arth_2602 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | PFAM: putative esterase; KEGG: nfa:pnf1550 putative esterase. | 0.573 |
Arth_0010 | Arth_3913 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | KEGG: lxx:Lxx24950 hypothetical protein. | 0.528 |
Arth_0010 | Arth_4011 | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | KEGG: sco:SCO5518 transcriptional regulator. | 0.461 |
Arth_0011 | Arth_0010 | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | 0.595 |
Arth_0011 | Arth_0811 | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | Hypothetical protein. | 0.675 |
Arth_0011 | Arth_1513 | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | KEGG: lxx:Lxx01410 hypothetical protein. | 0.409 |
Arth_0011 | Arth_3913 | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | KEGG: lxx:Lxx24950 hypothetical protein. | 0.887 |
Arth_0341 | Arth_0010 | PFAM: polysaccharide deacetylase; KEGG: chy:CHY_1591 polysaccharide deacetylase family protein. | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | 0.459 |
Arth_0537 | Arth_0010 | Hypothetical protein. | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | 0.575 |
Arth_0811 | Arth_0010 | Hypothetical protein. | PFAM: glycosyl transferase, family 2; KEGG: blo:BL1674 probable glycosyltransferase. | 0.555 |
Arth_0811 | Arth_0011 | Hypothetical protein. | Hypothetical protein; KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH. | 0.675 |
Arth_0811 | Arth_3913 | Hypothetical protein. | KEGG: lxx:Lxx24950 hypothetical protein. | 0.754 |
Arth_0811 | Arth_4011 | Hypothetical protein. | KEGG: sco:SCO5518 transcriptional regulator. | 0.709 |
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