STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0077Sarcosine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: ath:At2g24580 sarcosine oxidase family protein. (366 aa)    
Predicted Functional Partners:
Arth_3702
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0488 sarcosine oxidase, alpha subunit, heterotetrameric.
  
 
 0.946
Arth_3718
Dimethylglycine oxidase; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); KEGG: aor:AO090023000142 dimethylglycine dehydrogenase precursor; Belongs to the GcvT family.
  
 
 0.635
Arth_0078
Hypothetical protein; KEGG: lma:LmjF35.0500 proteophosphoglycan ppg3, putative.
       0.598
Arth_3703
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: pub:SAR11_1065 sarcosine oxidase delta chain.
  
 
 0.595
Arth_0076
PFAM: isochorismatase hydrolase; KEGG: cvi:CV4239 probable amidase from nicotinamidase family.
  
    0.574
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.555
Arth_1764
PFAM: peptidase M24; KEGG: bha:BH1739 Xaa-Pro dipeptidase.
  
 
 0.543
Arth_3596
PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: afu:AF1665 ornithine cyclodeaminase.
 
  
 0.467
Arth_1654
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
  
 
 0.432
Arth_3901
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: atc:AGR_L_2811 basic surface protein; TC 3.A.1.3.-.
 
    0.431
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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