Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0328Response regulator receiver and ANTAR domain protein; PFAM: ANTAR domain protein; KEGG: sco:SCO4029 hypothetical protein. (245 aa)    
Predicted Functional Partners:
Arth_0329
Response regulator receiver and ANTAR domain protein; PFAM: GAF domain protein; ANTAR domain protein; KEGG: nfa:nfa2980 hypothetical protein.
 
    
0.680
Arth_3801
ANTAR domain protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ANTAR domain protein; KEGG: sma:SAV4629 hypothetical protein.
 
     0.664
Arth_0327
Hypothetical protein.
       0.569
Arth_0330
KEGG: nfa:nfa2970 hypothetical protein.
       0.535
Arth_0778
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: tfu:Tfu_1186 branched-chain amino acid transport system substrate-binding protein; TC 3.A.1.4.-.
  
 
 0.470
Arth_1154
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: tfu:Tfu_1186 branched-chain amino acid transport system substrate-binding protein; TC 3.A.1.4.-.
  
 
 0.470
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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