STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0331Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP1783 hypothetical protein. (211 aa)    
Predicted Functional Partners:
Arth_3404
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
     0.606
Arth_3995
PFAM: regulatory protein, TetR; KEGG: sma:SAV5854 TetR-family transcriptional regulator.
  
   
 0.581
Arth_0332
PFAM: protein of unknown function DUF77; KEGG: lxx:Lxx19070 hypothetical protein.
       0.560
Arth_3547
Transcriptional regulator, CdaR family; KEGG: mpa:MAP2594 hypothetical protein.
  
     0.547
Arth_4062
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa45160 hypothetical protein.
  
     0.543
Arth_0162
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr2262 hypothetical protein.
 
    0.516
Arth_0164
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr2262 hypothetical protein.
 
    0.497
Arth_4018
PFAM: regulatory protein, TetR; KEGG: nfa:nfa43110 putative transcriptional regulator.
  
     0.496
Arth_0619
KEGG: fra:Francci3_2808 hypothetical protein.
  
     0.481
Arth_2556
PFAM: GtrA family protein; KEGG: fra:Francci3_0318 glycosyl transferase, family 2.
  
    0.447
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.