STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0342TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: nfa:nfa27660 putative glycosyl hydrolase. (1053 aa)    
Predicted Functional Partners:
Arth_1892
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lpl:lp_3133 beta-glucosides PTS, EIIBCA; TC 4.A.1.2.11; TC 4.A.1.2.11; TC 4.A.1.2.11.
  
  
 0.827
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.676
Arth_0744
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: pac:PPA1552 putative periplasmic maltose-binding protein; TC 3.A.1.1.-.
  
  
 0.624
Arth_3462
PFAM: phosphoribosyltransferase; dienelactone hydrolase; KEGG: mbo:Mb0586c hypothetical protein.
 
    0.620
Arth_0746
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1554 maltose transport system permease protein MalG; TC 3.A.1.1.-.
  
  
 0.599
Arth_3767
Alpha-1,6-glucosidase, pullulanase-type; KEGG: sco:SCO2226 bi-functional protein (secreted alpha-amylase/dextrinase); TIGRFAM: alpha-1,6-glucosidases, pullulanase-type; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.599
Arth_0237
6-phosphofructokinase; PFAM: PfkB domain protein; KEGG: pol:Bpro_2756 PfkB; Belongs to the carbohydrate kinase PfkB family.
 
    0.566
Arth_0300
PFAM: PfkB domain protein; KEGG: nfa:nfa28550 putative fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
    0.529
Arth_0341
PFAM: polysaccharide deacetylase; KEGG: chy:CHY_1591 polysaccharide deacetylase family protein.
       0.528
Arth_1791
PFAM: PfkB domain protein; KEGG: tfu:Tfu_0696 putative 6-phosphofructokinase : 1-phosphofructokinase.
 
    0.519
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.