STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0484PFAM: regulatory proteins, IclR; KEGG: sma:SAV6388 IclR-family transcriptional regulator. (273 aa)    
Predicted Functional Partners:
Arth_1725
PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator.
  
     0.774
Arth_1795
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: cgb:cg3388 bacterial regulatory proteins, IclR family.
  
     0.774
Arth_1796
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: blo:BL1530 probable IclR-type transcriptional regulator.
  
     0.774
Arth_3557
PFAM: regulatory proteins, IclR; KEGG: mta:Moth_0375 transcriptional regulator, IclR family.
  
     0.773
Arth_2053
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: cef:CE2861 putative transcription regulator.
  
     0.771
Arth_2285
PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator.
  
     0.771
Arth_3729
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: mlo:mlr8761 hypothetical protein.
  
     0.771
Arth_3485
PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator.
  
     0.770
Arth_0492
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: sme:SMc00263 putative transcription regulator protein.
  
     0.763
Arth_4044
PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator.
  
     0.762
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.