STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0515TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pac:PPA1954 predicted sugar phosphatase/hydrolase; Belongs to the HAD-like hydrolase superfamily. (276 aa)    
Predicted Functional Partners:
Arth_2511
PFAM: Dak phosphatase; KEGG: sma:SAV2674 putative dihydroxyacetone kinase.
     
 0.584
Arth_0517
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase.
       0.555
Arth_0516
Hypothetical protein.
       0.497
Arth_1203
TIGRFAM: integral membrane protein TIGR01906; KEGG: aae:aq_2036 putative protein.
  
    0.441
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.