Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Arth_0662 | Arth_0663 | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | 0.895 |
Arth_0662 | Arth_0664 | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | 0.878 |
Arth_0662 | Arth_0665 | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | 0.574 |
Arth_0663 | Arth_0662 | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | 0.895 |
Arth_0663 | Arth_0664 | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | 0.943 |
Arth_0663 | Arth_0665 | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | 0.548 |
Arth_0664 | Arth_0662 | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | 0.878 |
Arth_0664 | Arth_0663 | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | 0.943 |
Arth_0664 | Arth_0665 | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | 0.567 |
Arth_0665 | Arth_0662 | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator. | 0.574 |
Arth_0665 | Arth_0663 | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein. | 0.548 |
Arth_0665 | Arth_0664 | Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase. | Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. | 0.567 |