Arth_0806 protein (Arthrobacter sp. FB24) - STRING interaction network

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Score

Arth_0806

PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein. (569 aa)

Predicted Functional Partners:

Arth_0807

0.822

rpsO

0.586

rplU

0.580

rpsC

0.573

rpsG

0.573

rplT

0.570

rplC

0.569

rpsD

0.568

rpsT

0.566

rpsL

0.565

Your Current Organism:

Arthrobacter sp. FB24

NCBI taxonomy Id: 290399
Other names: A. sp. FB24

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arth_0806	Arth_0807	Arth_0806	Arth_0807	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7218 putative ABC-transport protein.	0.822
Arth_0806	rplC	Arth_0806	Arth_2975	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.569
Arth_0806	rplT	Arth_0806	Arth_1479	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).	0.570
Arth_0806	rplU	Arth_0806	Arth_2391	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.580
Arth_0806	rpsC	Arth_0806	Arth_2969	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.573
Arth_0806	rpsD	Arth_0806	Arth_2281	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.568
Arth_0806	rpsG	Arth_0806	Arth_2981	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.573
Arth_0806	rpsL	Arth_0806	Arth_2982	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.565
Arth_0806	rpsO	Arth_0806	Arth_1433	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.586
Arth_0806	rpsT	Arth_0806	Arth_2242	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.566
Arth_0807	Arth_0806	Arth_0807	Arth_0806	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7218 putative ABC-transport protein.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	0.822
rplC	Arth_0806	Arth_2975	Arth_0806	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein.	0.569
rplC	rplT	Arth_2975	Arth_1479	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).	0.996
rplC	rplU	Arth_2975	Arth_2391	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplC	rpsC	Arth_2975	Arth_2969	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplC	rpsD	Arth_2975	Arth_2281	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.995
rplC	rpsG	Arth_2975	Arth_2981	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.996
rplC	rpsL	Arth_2975	Arth_2982	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.997
rplC	rpsO	Arth_2975	Arth_1433	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.991
rplC	rpsT	Arth_2975	Arth_2242	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.974