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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0809KEGG: sco:SCO1584 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Arth_0808
PFAM: NUDIX hydrolase; KEGG: pae:PA3470 hypothetical protein.
       0.784
Arth_0810
Hypothetical protein.
 
     0.633
Arth_3404
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
     0.601
Arth_4062
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa45160 hypothetical protein.
  
     0.552
Arth_3067
PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.470
Arth_3011
Hypothetical protein.
  
     0.466
Arth_2409
KEGG: sco:SCO3813 hypothetical protein.
  
     0.447
Arth_3377
KEGG: lma:LmjF35.0290 hypothetical protein, conserved.
  
     0.444
Arth_2808
Hypothetical protein.
  
     0.439
Arth_0619
KEGG: fra:Francci3_2808 hypothetical protein.
  
     0.430
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.