STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1136PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: pac:PPA0411 zinc-binding dehydrogenase. (341 aa)    
Predicted Functional Partners:
Arth_1135
PFAM: OsmC family protein; KEGG: nfa:nfa44010 putative organic hydroperoxide resistance protein.
 
    0.874
Arth_1134
PFAM: regulatory protein, MarR; KEGG: nfa:nfa44020 putative transcriptional regulator.
 
     0.705
Arth_3009
KEGG: mtc:MT0952 hypothetical protein.
 
    0.487
Arth_1032
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: sth:STH404 putative NADH-ubiquinone oxidoreductase.
 
    0.445
Arth_0751
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.443
Arth_1133
Amidohydrolase; KEGG: tfu:Tfu_2564 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20.
       0.426
Arth_1137
PFAM: basic membrane lipoprotein; KEGG: pac:PPA1734 basic membrane lipoprotein.
       0.418
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.