STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1376Signal transduction histidine kinase, LytS; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: sma:SAV7118 putative two-component system sensor kinase. (405 aa)    
Predicted Functional Partners:
Arth_1375
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sco:SCO1220 regulatory protein.
 
 
 0.984
Arth_1374
KEGG: nfa:nfa17960 hypothetical protein.
 
     0.943
Arth_1373
PFAM: Na+/solute symporter; KEGG: nfa:nfa17950 putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.923
Arth_1377
PFAM: protein of unknown function DUF485; KEGG: nfa:nfa17940 hypothetical protein.
 
     0.651
Arth_1378
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: nfa:nfa17930 putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.649
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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