STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1396Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sco:SCO1137 two component system histidine kinase. (556 aa)    
Predicted Functional Partners:
Arth_1397
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: sco:SCO1136 putative two component system response regulator.
 
 
 0.973
Arth_1528
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: sco:SCO5434 two-component response regulator.
 
 
 0.894
Arth_1303
PFAM: response regulator receiver; KEGG: lxx:Lxx18120 two-component system, regulatory protein.
 
 
 0.891
Arth_1395
PFAM: Uncharacterized protein UPF0065; KEGG: sco:SCO1138 putative tricarboxylic transport membrane protein.
 
    0.865
Arth_1394
KEGG: sco:SCO1139 integral membrane protein.
 
     0.838
Arth_1393
PFAM: protein of unknown function DUF112, transmembrane; KEGG: sco:SCO1140 putative integral membrane protein.
 
     0.778
Arth_1392
PFAM: UspA domain protein; KEGG: rfr:Rfer_1020 UspA.
       0.404
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.