STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1663KEGG: lxx:Lxx13000 secreted protein. (443 aa)    
Predicted Functional Partners:
Arth_2416
KEGG: lxx:Lxx12770 hypothetical protein.
  
     0.718
Arth_1661
KEGG: mbo:Mb2693 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
       0.619
Arth_1662
KEGG: sco:SCO6059 hypothetical protein.
       0.588
Arth_2165
KEGG: sma:SAV6638 hypothetical protein.
  
     0.537
Arth_1685
KEGG: lxx:Lxx11260 hypothetical protein.
  
     0.527
Arth_1474
KEGG: lxx:Lxx15820 hypothetical protein.
  
    0.484
Arth_0772
PFAM: protein of unknown function DUF1212; KEGG: nfa:nfa24750 hypothetical protein.
 
     0.478
Arth_1205
PFAM: glycosyl transferase, family 39; KEGG: sma:SAV3592 integral membrane protein.
  
     0.465
Arth_0260
Hypothetical protein; KEGG: lxx:Lxx01060 protoporphyrinogen oxidase.
  
    0.447
Arth_0208
KEGG: lxx:Lxx18480 hypothetical protein.
  
     0.446
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.