STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1663KEGG: lxx:Lxx13000 secreted protein. (443 aa)    
Predicted Functional Partners:
Arth_2416
KEGG: lxx:Lxx12770 hypothetical protein.
  
     0.718
Arth_1661
KEGG: mbo:Mb2693 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
       0.632
Arth_1662
KEGG: sco:SCO6059 hypothetical protein.
       0.595
Arth_1892
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lpl:lp_3133 beta-glucosides PTS, EIIBCA; TC 4.A.1.2.11; TC 4.A.1.2.11; TC 4.A.1.2.11.
    
 
 0.548
Arth_2165
KEGG: sma:SAV6638 hypothetical protein.
  
     0.537
Arth_1685
KEGG: lxx:Lxx11260 hypothetical protein.
  
     0.527
Arth_3516
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; KEGG: pac:PPA0679 putative PTS system component IIA; TC 4.A.1.1.5.
    
 
 0.527
Arth_1474
KEGG: lxx:Lxx15820 hypothetical protein.
  
  
 0.491
Arth_0772
PFAM: protein of unknown function DUF1212; KEGG: nfa:nfa24750 hypothetical protein.
 
     0.477
Arth_1205
PFAM: glycosyl transferase, family 39; KEGG: sma:SAV3592 integral membrane protein.
  
     0.465
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.