STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1665PFAM: Fe-S metabolism associated SufE; KEGG: lxx:Lxx10540 hypothetical protein. (153 aa)    
Predicted Functional Partners:
Arth_1666
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: lxx:Lxx10550 thiosulfate sulfurtransferase.
 
     0.957
Arth_1664
TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sco:SCO2058 transcriptional regulatory protein.
       0.781
Arth_1235
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.733
Arth_2656
Cysteine desulfurase; PFAM: aminotransferase, class V; KEGG: nfa:nfa3810 putative aminotransferase.
  
 
 0.733
Arth_1667
PFAM: AFG1-family ATPase; KEGG: sma:SAV2207 ATP/GTP-binding protein.
       0.632
Arth_2106
KEGG: lxx:Lxx11680 multidrug Resistance Exporter; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.608
Arth_2103
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: sma:SAV6325 putative iron-regulated ABC-type transporter.
  
 
 0.415
Arth_2104
Iron-regulated ABC transporter permease protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: sco:SCO1924 hypothetical protein.
  
 
 0.415
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.