STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1925Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV1031 LacI-family transcriptional regulator. (358 aa)    
Predicted Functional Partners:
Arth_1699
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO0659 DeoR-family transcriptional regulator.
  
     0.689
Arth_1691
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: lxx:Lxx11320 glutamate synthase, alpha subunit.
    
 
 0.619
Arth_1924
KEGG: pfo:Pfl_0086 hypothetical protein.
       0.580
Arth_1923
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: aba:Acid345_2658 glucose-methanol-choline oxidoreductase.
       0.490
Arth_1926
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dsy:DSY0376 hypothetical protein.
       0.454
Arth_1921
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: sme:SMb20854 putative sugar uptake ABC transporter permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.440
Arth_1922
PFAM: aldo/keto reductase; KEGG: sma:SAV1404 oxidoreductase.
       0.411
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.