STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1931PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: nfa:nfa35210 putative muconate cycloisomerase. (366 aa)    
Predicted Functional Partners:
Arth_1932
PFAM: Muconolactone delta-isomerase; KEGG: reu:Reut_A1690 muconolactone delta-isomerase.
 
 
 0.972
Arth_1933
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase, N-terminal domain protein; KEGG: nfa:nfa35220 putative catechol 1,2-dioxygenase.
 
 
 0.939
Arth_1930
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: nfa:nfa35200 putative transcriptional regulator.
 
     0.858
Arth_4077
TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: sco:SCO6699 protocatechuate 3,4-dioxygenase alpha subunit.
  
  
 0.657
Arth_2000
PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cef:CE0556 hypothetical protein.
 
     0.576
Arth_1929
2,4-dichlorophenol 6-monooxygenase; PFAM: monooxygenase, FAD-binding; KEGG: cef:CE2219 putative phenol 2-monooxygenase.
     
 0.499
Arth_1935
4-hydroxyphenylacetate 3-monooxygenase oxygenase component; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: nfa:nfa43650 putative phenol hydroxylase large subunit.
 
   
 0.482
Arth_1049
Hypothetical protein; KEGG: cme:CMX008C similar to hedgehog protein Pfam: PLRV_ORF5 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH.
  
     0.425
Arth_1996
PFAM: PEP-utilising enzyme, mobile region; KEGG: cef:CE0560 putative phosphoenolpyruvate synthase.
  
     0.412
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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