STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1966PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa45140 putative oxidoreductase. (340 aa)    
Predicted Functional Partners:
Arth_0430
Methyltransferase type 12; PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: nfa:nfa53200 hypothetical protein.
 
  
 0.929
Arth_1967
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO6549 hypothetical protein.
 
     0.844
Arth_1965
Transcriptional regulator, XRE family with cupin sensor; PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: nfa:nfa45130 hypothetical protein.
 
    0.793
Arth_3068
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin.
  
 
 0.700
Arth_3837
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin; Belongs to the thioredoxin family.
  
 
 0.700
Arth_1420
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sma:SAV7242 putative thioredoxin.
  
 
 0.667
Arth_4162
TIGRFAM: thioredoxin; PFAM: glutaredoxin; Thioredoxin domain; KEGG: lxx:Lxx25230 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.667
Arth_3914
PFAM: NHL repeat containing protein; KEGG: sco:SCO0142 hypothetical protein.
  
 
 0.624
Arth_2594
PFAM: Thioredoxin domain; KEGG: lxx:Lxx12560 thioredoxin.
  
 
 0.622
Arth_2774
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: tfu:Tfu_0520 rhodanese-like protein.
  
  
 0.569
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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