STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1979PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PF00253 probable D-amino acid oxidase protein. (373 aa)    
Predicted Functional Partners:
Arth_3702
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0488 sarcosine oxidase, alpha subunit, heterotetrameric.
  
 
 0.946
Arth_3703
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: pub:SAR11_1065 sarcosine oxidase delta chain.
  
 
 0.799
Arth_1982
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_9 glutamine transport system permease proetin/ATP-binding proetin; TC 3.A.1.3.-.
 
     0.681
Arth_3718
Dimethylglycine oxidase; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); KEGG: aor:AO090023000142 dimethylglycine dehydrogenase precursor; Belongs to the GcvT family.
 
 
 0.654
Arth_3701
PFAM: Sarcosine oxidase, gamma subunit; KEGG: bxe:Bxe_B1597 sarcosine oxidase, gamma subunit.
  
 
 0.647
Arth_1980
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: nfa:nfa23680 putative oxidoreductase.
  
    0.610
Arth_1981
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_9 glutamine transport system permease proetin/ATP-binding proetin; TC 3.A.1.3.-.
       0.605
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.566
Arth_1983
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ret:RHE_PF00255 glutamine ABC transporter, substrate binding protein; TC 3.A.1.3.-.
 
    0.566
Arth_1978
PFAM: cytochrome P450; KEGG: bld:BLi00706 similar to monooxygenase; RBL03740.
   
 
 0.504
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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