STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1981Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_9 glutamine transport system permease proetin/ATP-binding proetin; TC 3.A.1.3.-. (260 aa)    
Predicted Functional Partners:
Arth_1982
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_9 glutamine transport system permease proetin/ATP-binding proetin; TC 3.A.1.3.-.
 0.997
Arth_1983
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ret:RHE_PF00255 glutamine ABC transporter, substrate binding protein; TC 3.A.1.3.-.
 
 0.990
Arth_1595
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0840 similar to Glutamine ABC transporter (binding and transport protein); TC 3.A.1.3.-.
 
 0.929
Arth_1594
PFAM: extracellular solute-binding protein, family 3; KEGG: lin:lin0840 similar to Glutamine ABC transporter (binding and transport protein); TC 3.A.1.3.-.
 
 
 0.897
Arth_2803
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV1961 putative glutamate permease; TC 3.A.1.3.-.
 
 
 0.882
Arth_1746
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY0739 hypothetical protein; TC 3.A.1.3.-.
 
 0.880
Arth_2804
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5774 glutamate permease; TC 3.A.1.3.-.
 
 
 0.879
Arth_2344
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0171 polar amino acid transport system permease protein; TC 3.A.1.3.-.
 
 0.868
Arth_1747
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0305 amino acid ABC transporter, inner membrane subunit; TC 3.A.1.3.-.
 
 
 0.867
Arth_3135
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6401 putative ABC transporter permease protein; TC 3.A.1.3.-.
 
 
 0.862
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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