STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1985KEGG: tbd:Tbd_1061 putative diguanylate phosphodiesterase (EAL domain) with GAF sensor; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (485 aa)    
Predicted Functional Partners:
Arth_3854
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: tbd:Tbd_1061 putative diguanylate phosphodiesterase (EAL domain) with GAF sensor.
 
 
0.962
Arth_0476
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reu:Reut_B4255 GGDEF.
 
 0.930
Arth_1068
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: lpf:lpl1308 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
0.905
Arth_3769
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: hch:HCH_06689 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.817
Arth_1783
KEGG: ava:Ava_3868 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.764
Arth_3890
PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tel:tlr1153 two-component response regulator.
  
 
 0.762
Arth_3731
GAF sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: aci:ACIAD3176 conserved hypothetical protein; putative sensory transduction histidine kinase.
  
 
 0.681
Arth_0113
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_2016 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.612
Arth_1986
KEGG: cef:CE1105 putative magnesium chelatase.
       0.508
Arth_1771
KEGG: tbd:Tbd_1061 putative diguanylate phosphodiesterase (EAL domain) with GAF sensor; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.471
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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