STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1990PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sma:SAV1798 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (242 aa)    
Predicted Functional Partners:
Arth_0643
KEGG: sco:SCO6650 hypothetical protein.
 
     0.817
Arth_0644
PFAM: glycosyl transferase, group 1; KEGG: sma:SAV1795 glycosyl transferase.
 
  
 0.783
Arth_0642
Dehydrogenase; KEGG: sma:SAV1797 dehydrogenase.
 
     0.781
Arth_1991
PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1474 GCN5-related N-acetyltransferase.
  
    0.591
folD
Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.485
Arth_1456
PFAM: CinA domain protein; KEGG: sco:SCO5754 putative competence-damage inducible protein; Belongs to the CinA family.
  
  
 0.465
Arth_3538
KEGG: dsy:DSY2864 hypothetical protein.
  
     0.405
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.