STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2000PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: cef:CE0556 hypothetical protein. (262 aa)    
Predicted Functional Partners:
Arth_1998
PFAM: ferredoxin; KEGG: cef:CE0558 putative rhodocoxin.
 
    0.972
Arth_1999
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cef:CE0557 putative rubredoxin reductase.
 
  
 0.930
Arth_1996
PFAM: PEP-utilising enzyme, mobile region; KEGG: cef:CE0560 putative phosphoenolpyruvate synthase.
 
    0.895
Arth_1994
PFAM: cytochrome P450; KEGG: cgb:cg0645 cytochrome P450.
 
    0.887
Arth_1997
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: cgb:cg0641 probable short-chain dehydrogenase, secreted.
 
  
 0.886
Arth_2001
PFAM: aldehyde dehydrogenase; KEGG: cef:CE0555 putative aldehyde dehydrogenase.
 
   
 0.881
Arth_1049
Hypothetical protein; KEGG: cme:CMX008C similar to hedgehog protein Pfam: PLRV_ORF5 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH.
  
     0.643
Arth_1995
Pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; KEGG: cef:CE0561 hypothetical protein.
 
    0.628
Arth_1933
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase, N-terminal domain protein; KEGG: nfa:nfa35220 putative catechol 1,2-dioxygenase.
  
     0.616
Arth_1931
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: nfa:nfa35210 putative muconate cycloisomerase.
 
     0.576
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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