STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2006PFAM: major facilitator superfamily MFS_1; KEGG: hma:rrnAC1907 putative sugar transporter. (419 aa)    
Predicted Functional Partners:
Arth_1048
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: nfa:nfa6880 hypothetical protein.
 
     0.696
Arth_3891
KEGG: yps:YPTB2512 hypothetical protein.
  
     0.600
Arth_2007
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03; KEGG: sco:SCO6407 putative gamma-glutamyltranspeptidase (putative secreted protein); TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
       0.511
Arth_2005
PFAM: GatB/Yqey domain protein; KEGG: mpa:MAP0363 hypothetical protein.
       0.510
Arth_2008
KEGG: sma:SAV785 hypothetical protein.
 
     0.434
Arth_2004
PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: sco:SCO1622 putative 5'-3' exonuclease.
       0.428
Arth_0448
KEGG: ccr:CC2228 hypothetical protein.
  
     0.415
Arth_3991
KEGG: lxx:Lxx00670 hypothetical protein.
  
     0.410
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.