STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2008KEGG: sma:SAV785 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Arth_2009
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: psp:PSPPH_3035 D-isomer specific 2-hydroxyacid dehydrogenase family protein.
  
    0.517
Arth_3991
KEGG: lxx:Lxx00670 hypothetical protein.
 
     0.508
Arth_3711
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2383 GCN5-related N-acetyltransferase.
  
    0.501
Arth_2428
PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_1286 GCN5-related N-acetyltransferase.
  
    0.454
Arth_2497
KEGG: sma:SAV5969 hypothetical protein.
  
     0.436
Arth_2006
PFAM: major facilitator superfamily MFS_1; KEGG: hma:rrnAC1907 putative sugar transporter.
 
     0.434
Arth_3961
Hypothetical protein; KEGG: tfu:Tfu_3024 possible transmembrane protein.
  
     0.432
Arth_0447
PFAM: Patatin; KEGG: sco:SCO5322 hypothetical protein.
  
     0.427
Arth_2007
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03; KEGG: sco:SCO6407 putative gamma-glutamyltranspeptidase (putative secreted protein); TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
       0.413
Arth_0648
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa50910 hypothetical protein.
 
  
 0.400
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.