STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2018Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tfu:Tfu_0029 putative LysR-family transcriptional regulator. (304 aa)    
Predicted Functional Partners:
Arth_2019
Methylitaconate delta2-delta3-isomerase; PFAM: protein of unknown function DUF453; KEGG: bsu:BG12277 similar to unknown proteins.
 
    0.647
Arth_2017
NmrA family protein; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: lxx:Lxx16700 hypothetical protein.
       0.531
Arth_2020
Transporter, UIT1 family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: ret:RHE_CH00922 dicarboxylate-carrier protein; TC 9.B.48.
 
   
 0.526
Arth_1832
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tfu:Tfu_2825 putative LysR-family transcriptional regulator.
  
     0.455
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.