STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2020Transporter, UIT1 family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: ret:RHE_CH00922 dicarboxylate-carrier protein; TC 9.B.48. (418 aa)    
Predicted Functional Partners:
Arth_2019
Methylitaconate delta2-delta3-isomerase; PFAM: protein of unknown function DUF453; KEGG: bsu:BG12277 similar to unknown proteins.
 
    0.716
Arth_1989
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO1709 integral membrane transport protein.
  
    0.591
Arth_2012
PFAM: carboxyl transferase; KEGG: mpa:MAP0839c acetyl-CoA carboxylase carboxyl transferase.
 
   
 0.589
Arth_2018
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tfu:Tfu_0029 putative LysR-family transcriptional regulator.
 
   
 0.526
Arth_3873
PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: nfa:nfa52900 putative cation antiporter NADH dehydrogenase subunit; TC 2.A.63.1; TC 2.A.63.1.
  
  
 0.498
Arth_1892
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: lpl:lp_3133 beta-glucosides PTS, EIIBCA; TC 4.A.1.2.11; TC 4.A.1.2.11; TC 4.A.1.2.11.
  
  
 0.444
Arth_0846
PFAM: Na+/solute symporter; KEGG: sma:SAV5284 putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.438
Arth_2021
DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; KEGG: nfa:nfa56150 putative DNA polymerase IV family protein.
       0.411
Arth_3240
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
    0.411
Arth_2015
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sco:SCO2442 GntR-family transcriptional regulator.
 
    0.405
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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