Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Arth_2136Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: fra:Francci3_1487 two component transcriptional regulator, LuxR family. (254 aa)    
Predicted Functional Partners:
Arth_2135
Putative signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_1560 putative signal transduction histidine kinase.
 
 0.985
Arth_3460
Putative signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_1560 putative signal transduction histidine kinase.
 
 0.985
Arth_3491
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_0085 putative signal transduction histidine kinase.
 
 
 0.823
Arth_4135
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: lxx:Lxx08740 two-component system, sensor protein.
 
 
 0.810
Arth_0486
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: lxx:Lxx18210 two-component system, sensor protein.
 
 
 0.805
Arth_4148
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sco:SCO1369 two component system histidine kinase.
 
 
 0.795
Arth_1767
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rso:RSc0289 transmembrane sensor kinase vsrA transcription regulator protein.
 
 
 0.783
Arth_3494
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: aba:Acid345_4063 histidine kinase.
 
 
 0.777
Arth_3158
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV1811 regulatory protein.
  
  
 0.466
Arth_2137
PFAM: UspA domain protein; KEGG: lxx:Lxx22480 stress-inducible protein.
  
    0.455
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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