STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2136Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: fra:Francci3_1487 two component transcriptional regulator, LuxR family. (254 aa)    
Predicted Functional Partners:
Arth_2135
Putative signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_1560 putative signal transduction histidine kinase.
 
 0.987
Arth_3460
Putative signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_1560 putative signal transduction histidine kinase.
 
 0.987
Arth_3491
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: fra:Francci3_0085 putative signal transduction histidine kinase.
 
 
 0.840
Arth_4135
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: lxx:Lxx08740 two-component system, sensor protein.
 
 0.830
Arth_0486
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: lxx:Lxx18210 two-component system, sensor protein.
 
 0.827
Arth_4148
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sco:SCO1369 two component system histidine kinase.
 
 0.817
Arth_1767
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rso:RSc0289 transmembrane sensor kinase vsrA transcription regulator protein.
 
 
 0.800
Arth_3494
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: aba:Acid345_4063 histidine kinase.
 
 
 0.795
Arth_3769
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: hch:HCH_06689 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
 0.458
Arth_3710
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; Bacterio-opsin activator, HTH domain protein; KEGG: nfa:nfa12240 putative transcriptional regulator.
 
 
 0.456
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.