STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2139KEGG: nfa:nfa25540 putative short chain dehydrogenase. (483 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
 
  
 0.805
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
  
 0.749
Arth_2138
KEGG: mpa:MAP3272 hypothetical protein.
  
    0.540
Arth_2012
PFAM: carboxyl transferase; KEGG: mpa:MAP0839c acetyl-CoA carboxylase carboxyl transferase.
 
  
 0.478
Arth_0194
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpa:MAP3344c hypothetical protein.
 
 
 0.473
Arth_2141
TIGRFAM: glycogen synthase; PFAM: glycosyl transferase, group 1; KEGG: blo:BL0826 possible glycosyltransferase.
  
    0.455
Arth_2466
KEGG: sma:SAV5788 putative malonyl-CoA:acyl carrier protein malonyltransferase.
  
 
 0.449
Arth_3917
PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: sma:SAV2095 putative beta-galactosidase.
  
  
 0.441
Arth_4160
Hypothetical protein; KEGG: sco:SCO2345 peptidodoglycan-binding membrane protein.
   
 0.422
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.