STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_2382TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: pae:PA0128 PhnA protein. (116 aa)    
Predicted Functional Partners:
Arth_2381
Oxidoreductase; KEGG: sco:SCO1142 oxidoreductase.
       0.624
Arth_4004
TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA0087 PTS system, mannitol-specific IIabc component.
     
 0.576
Arth_2380
23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
       0.446
rplQ
PFAM: ribosomal protein L17; KEGG: lxx:Lxx20070 50S ribosomal protein L17.
  
    0.409
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.