STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpqBKEGG: lxx:Lxx05370 lipoprotein. (573 aa)    
Predicted Functional Partners:
Arth_2711
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sma:SAV5064 putative two-component system sensor kinase.
 
  
 0.976
Arth_2712
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV5063 putative two-component system response regulator.
     
 0.760
Arth_2709
PFAM: phosphoribosyltransferase; KEGG: tfu:Tfu_2493 hypothetical protein.
 
     0.724
Arth_3404
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
   
 0.694
Arth_2595
KEGG: lxx:Lxx12550 hypothetical protein.
  
     0.633
Arth_2715
KEGG: mpa:MAP0360c hypothetical protein.
 
     0.624
Arth_4160
Hypothetical protein; KEGG: sco:SCO2345 peptidodoglycan-binding membrane protein.
  
     0.619
Arth_1194
KEGG: sco:SCO3032 secreted protein.
 
     0.617
Arth_1474
KEGG: lxx:Lxx15820 hypothetical protein.
 
 
   0.611
Arth_2409
KEGG: sco:SCO3813 hypothetical protein.
  
     0.607
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.