STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3206Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: mpa:MAP0964c hypothetical protein. (481 aa)    
Predicted Functional Partners:
Arth_3195
PFAM: lipopolysaccharide biosynthesis; KEGG: cgb:cg0414 cell surface polysaccharide biosynthesis/chain length determinant protein.
 
  
 0.916
Arth_4051
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase, family 2; glycosyl transferase WecB/TagA/CpsF; KEGG: fra:Francci3_1573 glycosyl transferase, family 2.
 
  
 0.834
Arth_2678
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.820
Arth_3208
KEGG: fra:Francci3_3471 hypothetical protein.
 
  
 0.799
Arth_3221
PFAM: lipopolysaccharide biosynthesis; KEGG: fra:Francci3_3472 protein-tyrosine kinase.
 
  
 0.783
Arth_3205
PFAM: glycosyl transferase, group 1; KEGG: gvi:glr1526 probable glycosyltransferase.
 
  
 0.736
Arth_4055
PFAM: polysaccharide biosynthesis protein; KEGG: mlo:mll5270 probable succinoglycan transport protein.
 
  
 0.673
Arth_3207
PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cgb:cg3154 UDP-glucose 6-dehydrogenase.
     
 0.655
Arth_1132
Mannose-6-phosphate isomerase, type 2; PFAM: Nucleotidyl transferase; KEGG: lxx:Lxx04570 mannose-1-phosphate guanylyltransferase.
 
  
 0.616
Arth_1493
TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding; KEGG: nfa:nfa3790 putative non-ribosomal peptide synthetase.
  
  
 0.611
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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