STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3209Hypothetical protein; KEGG: rso:RSc2654 probable serine protease protein. (200 aa)    
Predicted Functional Partners:
Arth_3208
KEGG: fra:Francci3_3471 hypothetical protein.
       0.560
Arth_0389
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sco:SCO6751 putative efflux protein.
   
    0.481
Arth_3207
PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: cgb:cg3154 UDP-glucose 6-dehydrogenase.
       0.463
Arth_3210
PFAM: VanZ family protein; KEGG: lxx:Lxx24630 hypothetical protein.
       0.406
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.