STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3402PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV2790 putative ABC transporter ATP-binding protein. (339 aa)    
Predicted Functional Partners:
Arth_3401
PFAM: ABC transporter, transmembrane region; KEGG: sma:SAV2790 putative ABC transporter ATP-binding protein.
     0.993
Arth_3403
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx19590 ABC transporter, ATP-binding protein.
 
    
0.820
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.758
Arth_2876
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ava:Ava_2224 ABC transporter-like.
 
 
 
0.638
Arth_3806
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: lxx:Lxx23760 DnaJ protein.
 
 
 0.557
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
 
 
 0.534
Arth_3400
PFAM: metallophosphoesterase; KEGG: sma:SAV4581 hypothetical protein.
  
    0.515
Arth_1022
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: bld:BLi04176 hypothetical protein.
 
 
 0.504
Arth_3399
PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: sco:SCO3580 transpeptidase.
       0.491
Arth_2774
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: tfu:Tfu_0520 rhodanese-like protein.
 
 0.451
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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