STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3545PFAM: sodium:dicarboxylate symporter; KEGG: rfr:Rfer_3455 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (433 aa)    
Predicted Functional Partners:
Arth_3544
PFAM: fumarate lyase; KEGG: sma:SAV1315 putative aspartate ammonia-lyase.
  
  
 0.597
Arth_3546
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR.
       0.584
Arth_1130
KEGG: sco:SCO4857 putative succinate dehydrogenase membrane subunit.
   
  
 0.524
Arth_3884
PFAM: aldehyde dehydrogenase; Proline dehydrogenase; KEGG: lxx:Lxx02530 proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.504
Arth_1691
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: lxx:Lxx11320 glutamate synthase, alpha subunit.
     
 0.450
glsA
L-glutaminase; PFAM: glutaminase; KEGG: cvi:CV4158 glutaminase; Belongs to the glutaminase family.
  
  
 0.402
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.