Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Arth_3547Transcriptional regulator, CdaR family; KEGG: mpa:MAP2594 hypothetical protein. (532 aa)    
Predicted Functional Partners:
glsA
L-glutaminase; PFAM: glutaminase; KEGG: cvi:CV4158 glutaminase; Belongs to the glutaminase family.
       0.783
Arth_4062
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa45160 hypothetical protein.
  
     0.727
Arth_3404
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
    0.696
Arth_0942
KEGG: sco:SCO0316 DNA-binding protein.
  
     0.686
Arth_0537
Hypothetical protein.
  
     0.625
Arth_3995
PFAM: regulatory protein, TetR; KEGG: sma:SAV5854 TetR-family transcriptional regulator.
  
     0.612
Arth_0788
KEGG: sma:SAV3911 hypothetical protein.
  
     0.593
Arth_1379
KEGG: ddi:DDB0188399 hypothetical protein.
  
     0.591
Arth_2409
KEGG: sco:SCO3813 hypothetical protein.
  
     0.564
Arth_3549
Asparagine:proton symporter, AAT family; PFAM: amino acid permease-associated region; KEGG: atc:AGR_L_2082 L-asparagine permease; TC 2.A.3.1.8.
       0.564
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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