STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3570KEGG: mbu:Mbur_1143 hypothetical protein. (119 aa)    
Predicted Functional Partners:
Arth_3571
KEGG: fra:Francci3_2923 putative transmembrane protein.
 
     0.808
Arth_2461
PFAM: Silent information regulator protein Sir2; KEGG: nfa:nfa43380 putative Sir2 family regulator.
   
   0.603
Arth_3784
Hypothetical protein.
  
     0.561
Arth_3233
KEGG: sma:SAV1106 hypothetical protein.
  
     0.497
Arth_2205
methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr1095 hypothetical protein.
 
     0.489
Arth_3389
Hypothetical protein; KEGG: dra:DRA0202 superoxide dismutase (sodC), Cu-Zn family.
  
     0.446
Arth_1941
PFAM: Clostridial hydrophobic; KEGG: cac:CAC2533 protein containing ChW-repeats.
  
     0.445
Arth_3158
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV1811 regulatory protein.
  
     0.433
Arth_3572
Sodium/proton antiporter, CPA1 family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
       0.424
Arth_1243
Animal heme peroxidase; PFAM: S-layer domain protein domain protein; Hemolysin-type calcium-binding region; Animal haem peroxidase; Fibronectin, type III domain protein; KEGG: ppu:PP2561 secreted hemolysin-type calcium-binding bacteriocin, putative.
 
     0.404
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.