STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_4100KEGG: bja:bsl6676 hypothetical protein. (90 aa)    
Predicted Functional Partners:
Arth_2031
KEGG: sma:SAV1696 hypothetical protein.
  
     0.524
Arth_4083
PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mpa:MAP0341 putative DNA ligase.
  
     0.513
Arth_4101
Hypothetical protein.
       0.480
Arth_3288
KEGG: mpa:MAP0528 hypothetical protein.
  
     0.428
Arth_3609
SMART: HNH nuclease; KEGG: fra:Francci3_0800 HNH nuclease.
  
     0.427
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.