STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Paes_0560PFAM: Biopolymer transport protein ExbD/TolR; KEGG: psp:PSPPH_0912 TonB system transport protein. (137 aa)    
Predicted Functional Partners:
Paes_0561
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.971
Paes_0559
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: nis:NIS_1422 periplasmic protein TonB.
 
 
 0.920
Paes_0562
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT1754 receptor, putative.
 
  
 0.798
Paes_0565
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0852 TonB-dependent outer membrane receptor for Fe3+/colicin I.
 
  
 0.762
Paes_0570
PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT1586 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.748
Paes_0588
PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT1586 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.745
Paes_0747
TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cph:Cpha266_0856 MotA/TolQ/ExbB proton channel.
 
 
 0.734
Paes_1282
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eba:ebA2117 hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
  
 0.607
Paes_1301
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_2970 TonB-dependent receptor protein.
 
   
 0.566
Paes_1271
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pvi:Cvib_0812 TonB-dependent receptor.
 
   
 0.561
Your Current Organism:
Prosthecochloris aestuarii
NCBI taxonomy Id: 290512
Other names: P. aestuarii DSM 271, Prosthecochloris aestuarii DSM 271, Prosthecochloris aestuarii SK 413, Prosthecochloris aestuarii SK413/DSMZ 271(t), Prosthecochloris aestuarii str. DSM 271, Prosthecochloris aestuarii strain DSM 271
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.