Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Paes_0642 | Paes_0645 | KEGG: cph:Cpha266_1698 integrase, catalytic region. | KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.791 |
Paes_0642 | Paes_0646 | KEGG: cph:Cpha266_1698 integrase, catalytic region. | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | 0.774 |
Paes_0642 | Paes_1100 | KEGG: cph:Cpha266_1698 integrase, catalytic region. | KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.791 |
Paes_0644 | Paes_0645 | Hypothetical protein. | KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.620 |
Paes_0644 | Paes_0646 | Hypothetical protein. | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | 0.551 |
Paes_0645 | Paes_0642 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.791 |
Paes_0645 | Paes_0644 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | Hypothetical protein. | 0.620 |
Paes_0645 | Paes_0646 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | 0.925 |
Paes_0645 | Paes_1103 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.784 |
Paes_0646 | Paes_0642 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.774 |
Paes_0646 | Paes_0644 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | Hypothetical protein. | 0.551 |
Paes_0646 | Paes_0645 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.925 |
Paes_0646 | Paes_0649 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.774 |
Paes_0646 | Paes_1100 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.774 |
Paes_0646 | Paes_1103 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.774 |
Paes_0646 | Paes_2098 | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | PFAM: Integrase catalytic region; KEGG: plt:Plut_1855 conserved hypothetical transposase. | 0.774 |
Paes_0649 | Paes_0646 | PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1698 integrase, catalytic region. | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | 0.774 |
Paes_1100 | Paes_0642 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.791 |
Paes_1100 | Paes_0646 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | PFAM: transposase IS3/IS911 family protein; KEGG: pvi:Cvib_0645 putative transposase. | 0.774 |
Paes_1100 | Paes_1103 | KEGG: plt:Plut_1855 conserved hypothetical transposase. | KEGG: cph:Cpha266_1698 integrase, catalytic region. | 0.835 |
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