Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Paes_0113 | Paes_0941 | Paes_0113 | Paes_0941 | KEGG: eba:ebA5272 putative acetyltransferase; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.401 |
Paes_0113 | Paes_2260 | Paes_0113 | Paes_2260 | KEGG: eba:ebA5272 putative acetyltransferase; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase. | Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein. | 0.751 |
Paes_0939 | Paes_0940 | Paes_0939 | Paes_0940 | PFAM: phospholipid/glycerol acyltransferase; KEGG: pvi:Cvib_1002 phospholipid/glycerol acyltransferase. | KEGG: pvi:Cvib_1001 hypothetical protein. | 0.774 |
Paes_0939 | Paes_0941 | Paes_0939 | Paes_0941 | PFAM: phospholipid/glycerol acyltransferase; KEGG: pvi:Cvib_1002 phospholipid/glycerol acyltransferase. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.634 |
Paes_0940 | Paes_0939 | Paes_0940 | Paes_0939 | KEGG: pvi:Cvib_1001 hypothetical protein. | PFAM: phospholipid/glycerol acyltransferase; KEGG: pvi:Cvib_1002 phospholipid/glycerol acyltransferase. | 0.774 |
Paes_0940 | Paes_0941 | Paes_0940 | Paes_0941 | KEGG: pvi:Cvib_1001 hypothetical protein. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.634 |
Paes_0941 | Paes_0113 | Paes_0941 | Paes_0113 | KEGG: pvi:Cvib_1000 hypothetical protein. | KEGG: eba:ebA5272 putative acetyltransferase; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase. | 0.401 |
Paes_0941 | Paes_0939 | Paes_0941 | Paes_0939 | KEGG: pvi:Cvib_1000 hypothetical protein. | PFAM: phospholipid/glycerol acyltransferase; KEGG: pvi:Cvib_1002 phospholipid/glycerol acyltransferase. | 0.634 |
Paes_0941 | Paes_0940 | Paes_0941 | Paes_0940 | KEGG: pvi:Cvib_1000 hypothetical protein. | KEGG: pvi:Cvib_1001 hypothetical protein. | 0.634 |
Paes_0941 | Paes_0942 | Paes_0941 | Paes_0942 | KEGG: pvi:Cvib_1000 hypothetical protein. | KEGG: pvi:Cvib_0104 hypothetical protein. | 0.443 |
Paes_0941 | Paes_2260 | Paes_0941 | Paes_2260 | KEGG: pvi:Cvib_1000 hypothetical protein. | Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein. | 0.455 |
Paes_0941 | birA | Paes_0941 | Paes_2191 | KEGG: pvi:Cvib_1000 hypothetical protein. | biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.647 |
Paes_0942 | Paes_0941 | Paes_0942 | Paes_0941 | KEGG: pvi:Cvib_0104 hypothetical protein. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.443 |
Paes_2260 | Paes_0113 | Paes_2260 | Paes_0113 | Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein. | KEGG: eba:ebA5272 putative acetyltransferase; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase. | 0.751 |
Paes_2260 | Paes_0941 | Paes_2260 | Paes_0941 | Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.455 |
birA | Paes_0941 | Paes_2191 | Paes_0941 | biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | KEGG: pvi:Cvib_1000 hypothetical protein. | 0.647 |