STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Paes_1411Methyltransferase type 11; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_2109 methyltransferase type 11. (292 aa)    
Predicted Functional Partners:
Paes_1578
PFAM: major facilitator superfamily MFS_1; KEGG: pvi:Cvib_1297 major facilitator superfamily MFS_1.
  
     0.709
Paes_0483
KEGG: cph:Cpha266_0524 hypothetical protein.
 
    0.696
Paes_1912
KEGG: cph:Cpha266_1229 succinylglutamate desuccinylase/aspartoacylase.
  
     0.629
Paes_1934
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_2269 FAD dependent oxidoreductase.
 
     0.593
Paes_0162
KEGG: cph:Cpha266_2508 hypothetical protein.
  
     0.520
Paes_1911
KEGG: cph:Cpha266_1230 hypothetical protein.
  
     0.493
Paes_0025
PFAM: Rhodanese domain protein; KEGG: cph:Cpha266_0124 rhodanese domain protein.
  
     0.481
Paes_1253
PFAM: alpha/beta hydrolase fold; KEGG: cte:CT0947 hydrolase, alpha/beta hydrolase fold family.
 
     0.427
Your Current Organism:
Prosthecochloris aestuarii
NCBI taxonomy Id: 290512
Other names: P. aestuarii DSM 271, Prosthecochloris aestuarii DSM 271, Prosthecochloris aestuarii SK 413, Prosthecochloris aestuarii SK413/DSMZ 271(t), Prosthecochloris aestuarii str. DSM 271, Prosthecochloris aestuarii strain DSM 271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.